Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AC091305.1-201ENST00000479476 895 ntBASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AC008764.7-201ENST00000593779 1081 ntBASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AC005837.3-201ENST00000612163 286 ntBASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 LINC01006-201ENST00000333319 2292 ntBASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RASA4CP-201ENST00000424092 1398 ntBASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SLC47A1P1-202ENST00000449666 945 ntBASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MIR638-201ENST00000385237 100 ntBASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MIR939-201ENST00000401314 82 ntBASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AC099791.1-201ENST00000416440 715 ntBASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AP001330.3-201ENST00000520123 633 ntBASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms