Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
TRBV6-7A0A0A0MS04 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 BX842568.3-201ENST00000418104 571 ntBASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 AC133561.4-201ENST00000566112 224 ntBASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-7A0A0A0MS04 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-7A0A0A0MS04 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRBV6-7A0A0A0MS04 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 AFG3L1P-217ENST00000557444 2447 ntBASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-7A0A0A0MS04 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms