Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 AP004607.7-201ENST00000527152 1677 ntBASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
TRAV18A0A075B6X5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV18A0A075B6X5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
TRAV18A0A075B6X5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.96■□□□□ 0.46
TRAV18A0A075B6X5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV18A0A075B6X5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV18A0A075B6X5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV18A0A075B6X5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 OR2I1P-207ENST00000453522 948 ntBASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV18A0A075B6X5 AC027702.1-201ENST00000563810 1770 ntBASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV18A0A075B6X5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms