Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 MIR6724-1-201ENST00000616420 92 ntBASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 MIR6724-2-201ENST00000616483 92 ntBASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 MIR6724-4-201ENST00000617390 92 ntBASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 MIR6724-3-201ENST00000622482 92 ntBASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.73■□□□□ 0.59
EXOSC1Q9Y3B2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.72■□□□□ 0.59
EXOSC1Q9Y3B2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 AC027702.1-201ENST00000563810 1770 ntBASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 AC099791.2-201ENST00000605725 427 ntBASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 AC121338.2-201ENST00000622535 1744 ntBASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXOSC1Q9Y3B2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
EXOSC1Q9Y3B2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 MIR3181-201ENST00000578512 73 ntBASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 AC020907.5-201ENST00000624372 1936 ntBASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.7■□□□□ 0.58
EXOSC1Q9Y3B2 AP006587.3-201ENST00000525742 1516 ntBASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EXOSC1Q9Y3B2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXOSC1Q9Y3B2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms