Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1Q9Y2A7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1Q9Y2A7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1Q9Y2A7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1Q9Y2A7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1Q9Y2A7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 FAM201B-201ENST00000458407 597 ntBASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 AC098934.4-201ENST00000564127 592 ntBASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 AC092118.2-201ENST00000613495 667 ntBASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKAP1Q9Y2A7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 RARRES2P4-201ENST00000514074 484 ntBASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKAP1Q9Y2A7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NCKAP1Q9Y2A7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 AC245052.3-201ENST00000450182 901 ntBASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NCKAP1Q9Y2A7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKAP1Q9Y2A7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 AC010980.2-201ENST00000587099 1412 ntBASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 AC097658.1-201ENST00000475555 843 ntBASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCKAP1Q9Y2A7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 AC079834.2-201ENST00000609776 1949 ntBASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 CDV3P1-201ENST00000471403 739 ntBASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 RNA5SP413-201ENST00000516373 109 ntBASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NCKAP1Q9Y2A7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKAP1Q9Y2A7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms