Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 KRT19P1-201ENST00000405746 1186 ntBASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 NTF6G-201ENST00000591094 616 ntBASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.17■■□□□ 1.14
PCDHGC3Q9UN70 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGC3Q9UN70 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 AC120498.10-201ENST00000621827 505 ntBASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC3Q9UN70 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
PCDHGC3Q9UN70 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 SLC7A5P2-201ENST00000553010 536 ntBASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDHGC3Q9UN70 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC3Q9UN70 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 SLC7A5P1-201ENST00000568957 537 ntBASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC3Q9UN70 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 KRT18P5-201ENST00000436075 1291 ntBASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms