Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38AQ9H6F2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38AQ9H6F2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38AQ9H6F2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38AQ9H6F2 AP005212.1-201ENST00000581547 1997 ntBASIC19.52■□□□□ 0.71
TMEM38AQ9H6F2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 TSPY26P-201ENST00000476365 1326 ntBASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38AQ9H6F2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38AQ9H6F2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38AQ9H6F2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 MIR572-201ENST00000384983 95 ntBASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM38AQ9H6F2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 EDA-201ENST00000338901 1233 ntBASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 AC131212.1-201ENST00000613771 668 ntBASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 AC106739.1-201ENST00000617035 715 ntBASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 AC073314.1-201ENST00000568729 2216 ntBASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38AQ9H6F2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms