Protein–RNA interactions for Protein: Q9H2M9

RAB3GAP2, Rab3 GTPase-activating protein non-catalytic subunit, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2Q9H2M9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RAB3GAP2Q9H2M9 AL024507.2-201ENST00000606070 2574 ntBASIC31.2■■■□□ 2.58
RAB3GAP2Q9H2M9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAB3GAP2Q9H2M9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.2■■■□□ 2.58
RAB3GAP2Q9H2M9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAB3GAP2Q9H2M9 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAB3GAP2Q9H2M9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 DUX4L16-201ENST00000555130 1264 ntBASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAB3GAP2Q9H2M9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 CNN2P6-201ENST00000439038 900 ntBASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 AC010536.3-201ENST00000620306 533 ntBASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 AC073111.5-205ENST00000641717 521 ntBASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 RBM17P2-201ENST00000616397 1405 ntBASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
RAB3GAP2Q9H2M9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
RAB3GAP2Q9H2M9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 FEM1AP4-201ENST00000443167 1987 ntBASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RAB3GAP2Q9H2M9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 CDCA4P2-201ENST00000441182 718 ntBASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RAB3GAP2Q9H2M9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
RAB3GAP2Q9H2M9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 AC080038.1-201ENST00000611274 1154 ntBASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 AC120498.10-201ENST00000621827 505 ntBASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 AC007375.3-201ENST00000600936 2314 ntBASIC31.13■■■□□ 2.57
RAB3GAP2Q9H2M9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 AF106564.1-201ENST00000607058 2553 ntBASIC31.12■■■□□ 2.57
RAB3GAP2Q9H2M9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.11■■■□□ 2.57
RAB3GAP2Q9H2M9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
RAB3GAP2Q9H2M9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAB3GAP2Q9H2M9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAB3GAP2Q9H2M9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAB3GAP2Q9H2M9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms