Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 AC006058.3-201ENST00000606217 1069 ntBASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC46A1Q96NT5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 AL158047.1-201ENST00000445918 881 ntBASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 AC142381.4-202ENST00000563973 229 ntBASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC46A1Q96NT5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 AC128676.1-201ENST00000454392 318 ntBASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC46A1Q96NT5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC46A1Q96NT5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
SLC46A1Q96NT5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC46A1Q96NT5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC46A1Q96NT5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC46A1Q96NT5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC46A1Q96NT5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC46A1Q96NT5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 KRT16P2-201ENST00000414673 1423 ntBASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 RPS2P4-201ENST00000476944 856 ntBASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 RBM17P2-201ENST00000616397 1405 ntBASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 AL117328.2-201ENST00000624617 1940 ntBASIC20.06■□□□□ 0.8
SLC46A1Q96NT5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms