Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 AC006128.1-201ENST00000624704 1661 ntBASIC18.82■□□□□ 0.6
PTP4A1Q93096 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A1Q93096 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.82■□□□□ 0.6
PTP4A1Q93096 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 AL355001.2-201ENST00000620617 1191 ntBASIC18.81■□□□□ 0.6
PTP4A1Q93096 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.81■□□□□ 0.6
PTP4A1Q93096 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A1Q93096 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.8■□□□□ 0.6
PTP4A1Q93096 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A1Q93096 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.8■□□□□ 0.6
PTP4A1Q93096 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 AL391422.3-201ENST00000603791 2761 ntBASIC18.79■□□□□ 0.6
PTP4A1Q93096 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTP4A1Q93096 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.79■□□□□ 0.6
PTP4A1Q93096 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTP4A1Q93096 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms