Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 AC131281.2-201ENST00000520478 145 ntBASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4Y2Q8TD47 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 AC121338.2-201ENST00000622535 1744 ntBASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 SYT6-210ENST00000641643 1587 ntBASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
RPS4Y2Q8TD47 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
RPS4Y2Q8TD47 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4Y2Q8TD47 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4Y2Q8TD47 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.33■□□□□ 0.53
RPS4Y2Q8TD47 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4Y2Q8TD47 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
RPS4Y2Q8TD47 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 DUX4L19-201ENST00000557448 1267 ntBASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4Y2Q8TD47 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 AC020907.5-201ENST00000624372 1936 ntBASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 AL136116.3-201ENST00000402907 1138 ntBASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 AC133561.4-201ENST00000566112 224 ntBASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 AC007225.1-201ENST00000566331 1836 ntBASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4Y2Q8TD47 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 AL162377.1-201ENST00000618844 1793 ntBASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RPS4Y2Q8TD47 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms