Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 AC023024.2-201ENST00000623561 1993 ntBASIC13.28□□□□□ -0.28
SVIPQ8NHG7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 AC004408.2-201ENST00000623613 2777 ntBASIC13.28□□□□□ -0.28
SVIPQ8NHG7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.28□□□□□ -0.28
SVIPQ8NHG7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SVIPQ8NHG7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 AC067852.2-201ENST00000590513 2313 ntBASIC13.27□□□□□ -0.29
SVIPQ8NHG7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SVIPQ8NHG7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SVIPQ8NHG7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms