Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRIML2Q8N7C3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 AC026471.6-201ENST00000622954 1905 ntBASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 MIR4466-201ENST00000606121 54 ntBASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIML2Q8N7C3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 LINC01006-201ENST00000333319 2292 ntBASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIML2Q8N7C3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIML2Q8N7C3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 AP004607.7-201ENST00000527152 1677 ntBASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 AF106564.1-201ENST00000607058 2553 ntBASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIML2Q8N7C3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIML2Q8N7C3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms