Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN4BQ8IWT1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.15■■□□□ 1.14
SCN4BQ8IWT1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SCN4BQ8IWT1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SCN4BQ8IWT1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.14■■□□□ 1.14
SCN4BQ8IWT1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SCN4BQ8IWT1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 AL117328.2-201ENST00000624617 1940 ntBASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 AC068338.2-201ENST00000563278 1430 ntBASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 RBM17P2-201ENST00000616397 1405 ntBASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SCN4BQ8IWT1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 AC012676.1-201ENST00000574705 1949 ntBASIC22.12■■□□□ 1.13
SCN4BQ8IWT1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 CYP2T1P-201ENST00000432607 1285 ntBASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 AC105036.2-201ENST00000569468 176 ntBASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.11■■□□□ 1.13
SCN4BQ8IWT1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 AC007322.4-201ENST00000509611 723 ntBASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 AF201337.1-201ENST00000520239 748 ntBASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.1■■□□□ 1.13
SCN4BQ8IWT1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCN4BQ8IWT1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 SLC29A4P1-201ENST00000398760 971 ntBASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 TSPY6P-201ENST00000448518 926 ntBASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.08■■□□□ 1.13
SCN4BQ8IWT1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms