Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC43A1-206ENST00000530159 788 ntTSL 516.92■□□□□ 0.39e-8■■■□□ 18.7
SND1Q7KZF4 SLC43A1-209ENST00000533515 774 ntTSL 513.86□□□□□ -0.199e-8■■■□□ 18.7
SND1Q7KZF4 SLC43A1-203ENST00000525764 556 ntTSL 313.56□□□□□ -0.249e-8■■■□□ 18.7
SND1Q7KZF4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.74e-7■■■□□ 18.6
SND1Q7KZF4 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.814e-7■■■□□ 18.6
SND1Q7KZF4 PTK7-214ENST00000481946 807 ntTSL 313.65□□□□□ -0.229e-8■■■□□ 18.6
SND1Q7KZF4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.642e-6■■■□□ 18.6
SND1Q7KZF4 ATP6V0B-210ENST00000498208 419 ntTSL 523.89■■□□□ 1.412e-9■■■□□ 18.6
SND1Q7KZF4 ATP6V0B-212ENST00000532072 577 ntTSL 47.32□□□□□ -1.242e-9■■■□□ 18.6
SND1Q7KZF4 OS9-222ENST00000552787 962 ntTSL 216.23■□□□□ 0.193e-8■■■□□ 18.6
SND1Q7KZF4 RNASET2-202ENST00000358165 2445 ntTSL 217.55■□□□□ 0.42e-14■■■□□ 18.6
SND1Q7KZF4 RNASET2-209ENST00000499370 2164 ntTSL 212.22□□□□□ -0.452e-14■■■□□ 18.6
SND1Q7KZF4 RNASET2-208ENST00000496851 881 ntTSL 510.47□□□□□ -0.732e-14■■■□□ 18.6
SND1Q7KZF4 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.88□□□□□ -0.039e-7■■■□□ 18.6
SND1Q7KZF4 GPR107-207ENST00000493417 2833 ntTSL 1 (best)14.49□□□□□ -0.099e-7■■■□□ 18.6
SND1Q7KZF4 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC12.17□□□□□ -0.469e-7■■■□□ 18.6
SND1Q7KZF4 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.499e-7■■■□□ 18.6
SND1Q7KZF4 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC11.69□□□□□ -0.549e-7■■■□□ 18.6
SND1Q7KZF4 NDUFA4-204ENST00000482299 606 ntTSL 26.77□□□□□ -1.334e-10■■■□□ 18.6
SND1Q7KZF4 UBIAD1-204ENST00000486588 831 ntTSL 514.77□□□□□ -0.052e-6■■■□□ 18.6
SND1Q7KZF4 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.93□□□□□ -0.182e-6■■■□□ 18.6
SND1Q7KZF4 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.272e-6■■■□□ 18.6
SND1Q7KZF4 UBIAD1-203ENST00000483738 1393 ntTSL 311.15□□□□□ -0.632e-6■■■□□ 18.6
SND1Q7KZF4 SCARB2-203ENST00000502908 2552 ntTSL 220.71■□□□□ 0.911e-8■■■□□ 18.6
SND1Q7KZF4 SCARB2-220ENST00000640076 1991 ntTSL 210.52□□□□□ -0.731e-8■■■□□ 18.6
SND1Q7KZF4 SCARB2-217ENST00000639324 842 ntTSL 58.93□□□□□ -0.981e-8■■■□□ 18.6
SND1Q7KZF4 SCARB2-226ENST00000640916 689 ntTSL 28.42□□□□□ -1.061e-8■■■□□ 18.6
SND1Q7KZF4 AC119674.2-202ENST00000641109 1675 ntAPPRIS ALT213.22□□□□□ -0.291e-6■■■□□ 18.6
SND1Q7KZF4 CES1-208ENST00000566555 659 ntTSL 321.9■■□□□ 1.18e-17■■■□□ 18.6
SND1Q7KZF4 TUSC3-207ENST00000508446 457 ntTSL 37.29□□□□□ -1.244e-9■■■□□ 18.6
SND1Q7KZF4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.04■□□□□ 0.84e-8■■■□□ 18.6
SND1Q7KZF4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.91■□□□□ 0.784e-8■■■□□ 18.6
SND1Q7KZF4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.414e-8■■■□□ 18.6
SND1Q7KZF4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.05■□□□□ 0.324e-8■■■□□ 18.6
SND1Q7KZF4 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.12■□□□□ 0.174e-8■■■□□ 18.6
SND1Q7KZF4 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.34e-8■■■□□ 18.6
SND1Q7KZF4 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.54□□□□□ -1.044e-8■■■□□ 18.6
SND1Q7KZF4 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.42□□□□□ -1.064e-8■■■□□ 18.6
SND1Q7KZF4 SULF2-205ENST00000465769 398 ntTSL 513.98□□□□□ -0.172e-7■■■□□ 18.6
SND1Q7KZF4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.042e-26■■■□□ 18.6
SND1Q7KZF4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.38□□□□□ -0.115e-11■■■□□ 18.6
SND1Q7KZF4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-10■■■□□ 18.5
SND1Q7KZF4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.6■□□□□ 0.094e-10■■■□□ 18.5
SND1Q7KZF4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-10■■■□□ 18.5
SND1Q7KZF4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.461e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-212ENST00000481876 822 ntTSL 316.82■□□□□ 0.281e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-210ENST00000472137 859 ntTSL 515.9■□□□□ 0.141e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-204ENST00000344036 681 ntTSL 315.68■□□□□ 0.11e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-208ENST00000468285 850 ntTSL 215.1■□□□□ 0.011e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-211ENST00000475142 819 ntTSL 315.1■□□□□ 0.011e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-213ENST00000498394 804 ntTSL 514.49□□□□□ -0.091e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.81□□□□□ -0.21e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-206ENST00000447677 738 ntTSL 310.42□□□□□ -0.741e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.261e-11■■■□□ 18.5
SND1Q7KZF4 VDAC2-201ENST00000298468 931 ntTSL 56.63□□□□□ -1.351e-11■■■□□ 18.5
SND1Q7KZF4 HSD17B11-204ENST00000507518 843 ntTSL 38.24□□□□□ -1.091e-7■■■□□ 18.5
SND1Q7KZF4 HSD17B11-202ENST00000502576 571 ntTSL 26.47□□□□□ -1.371e-7■■■□□ 18.5
SND1Q7KZF4 NRP1-214ENST00000466932 523 ntTSL 38.46□□□□□ -1.063e-6■■■□□ 18.5
SND1Q7KZF4 NRP1-210ENST00000418675 579 ntTSL 36.55□□□□□ -1.363e-6■■■□□ 18.5
SND1Q7KZF4 NRP1-211ENST00000431894 372 ntTSL 35.49□□□□□ -1.533e-6■■■□□ 18.5
SND1Q7KZF4 SLC39A7-203ENST00000444757 1015 ntTSL 511.57□□□□□ -0.561e-11■■■□□ 18.5
SND1Q7KZF4 SERPINE2-205ENST00000432738 988 ntTSL 315.28■□□□□ 0.045e-8■■■□□ 18.5
SND1Q7KZF4 ERLIN1-201ENST00000370408 962 ntTSL 522.39■■□□□ 1.174e-8■■■□□ 18.5
SND1Q7KZF4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.532e-9■■■□□ 18.5
SND1Q7KZF4 TNFRSF10B-203ENST00000518531 564 ntTSL 316.25■□□□□ 0.193e-6■■■□□ 18.5
SND1Q7KZF4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.498e-9■■■□□ 18.5
SND1Q7KZF4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.188e-9■■■□□ 18.5
SND1Q7KZF4 NUCB1-211ENST00000485798 938 ntTSL 315.69■□□□□ 0.18e-9■■■□□ 18.5
SND1Q7KZF4 CD9-210ENST00000543916 969 ntTSL 1 (best)15.65■□□□□ 0.11e-12■■■□□ 18.5
SND1Q7KZF4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.26■■□□□ 1.473e-18■■■□□ 18.5
SND1Q7KZF4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.173e-18■■■□□ 18.5
SND1Q7KZF4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.983e-18■■■□□ 18.5
SND1Q7KZF4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.343e-18■■■□□ 18.5
SND1Q7KZF4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.073e-18■■■□□ 18.5
SND1Q7KZF4 LMF2-206ENST00000514938 960 ntTSL 519.34■□□□□ 0.693e-7■■■□□ 18.5
SND1Q7KZF4 HMGCR-206ENST00000508070 450 ntTSL 38.18□□□□□ -1.11e-13■■■□□ 18.5
SND1Q7KZF4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.64e-8■■■□□ 18.5
SND1Q7KZF4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.544e-8■■■□□ 18.5
SND1Q7KZF4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.544e-8■■■□□ 18.5
SND1Q7KZF4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.33■■□□□ 1.494e-8■■■□□ 18.5
SND1Q7KZF4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.474e-8■■■□□ 18.5
SND1Q7KZF4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.75■■□□□ 1.394e-8■■■□□ 18.5
SND1Q7KZF4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.934e-8■■■□□ 18.5
SND1Q7KZF4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.74e-8■■■□□ 18.5
SND1Q7KZF4 AHSG-203ENST00000478441 1269 ntTSL 213.5□□□□□ -0.251e-323■■■□□ 18.5
SND1Q7KZF4 ASAH1-259ENST00000637792 581 ntTSL 49.03□□□□□ -0.967e-8■■■□□ 18.5
SND1Q7KZF4 SLC38A5-211ENST00000615300 797 ntTSL 315.75■□□□□ 0.111e-10■■■□□ 18.5
SND1Q7KZF4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.824e-7■■■□□ 18.5
SND1Q7KZF4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.275e-9■■■□□ 18.5
SND1Q7KZF4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.6■□□□□ 0.095e-9■■■□□ 18.5
SND1Q7KZF4 TMEM201-203ENST00000416541 3447 ntTSL 1 (best)12.24□□□□□ -0.455e-9■■■□□ 18.5
SND1Q7KZF4 HNRNPM-205ENST00000596295 910 ntTSL 318.64■□□□□ 0.574e-12■■■□□ 18.5
SND1Q7KZF4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.973e-6■■■□□ 18.4
SND1Q7KZF4 SREBF1-216ENST00000490796 698 ntTSL 220.35■□□□□ 0.858e-11■■■□□ 18.4
SND1Q7KZF4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.72■□□□□ 0.433e-6■■■□□ 18.4
SND1Q7KZF4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.394e-9■■■□□ 18.4
SND1Q7KZF4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.98■□□□□ 0.318e-8■■■□□ 18.4
SND1Q7KZF4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.236e-10■■■□□ 18.4
SND1Q7KZF4 EMC4-210ENST00000560911 579 ntTSL 216.32■□□□□ 0.29e-9■■■□□ 18.4
SND1Q7KZF4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.62■□□□□ 0.099e-9■■■□□ 18.4
Retrieved 100 of 13,567 protein–RNA pairs in 129.5 ms