RNA–Protein interactions for RNA: ENST00000508446.1

TUSC3-207, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-207ENST00000508446 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
TUSC3-207ENST00000508446 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
TUSC3-207ENST00000508446 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
TUSC3-207ENST00000508446 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
TUSC3-207ENST00000508446 FOXD1Q16676 465 aa20.23■□□□□ 0.83
TUSC3-207ENST00000508446 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
TUSC3-207ENST00000508446 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
TUSC3-207ENST00000508446 ADRA2BP18089 450 aa19.16■□□□□ 0.66
TUSC3-207ENST00000508446 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
TUSC3-207ENST00000508446 MSH5O43196 834 aa18.74■□□□□ 0.59
TUSC3-207ENST00000508446 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
TUSC3-207ENST00000508446 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
TUSC3-207ENST00000508446 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
TUSC3-207ENST00000508446 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
TUSC3-207ENST00000508446 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
TUSC3-207ENST00000508446 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
TUSC3-207ENST00000508446 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
TUSC3-207ENST00000508446 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
TUSC3-207ENST00000508446 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
TUSC3-207ENST00000508446 KCNA4P22459 653 aa16.69■□□□□ 0.26
TUSC3-207ENST00000508446 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
TUSC3-207ENST00000508446 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
TUSC3-207ENST00000508446 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
TUSC3-207ENST00000508446 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
TUSC3-207ENST00000508446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
TUSC3-207ENST00000508446 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
TUSC3-207ENST00000508446 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
TUSC3-207ENST00000508446 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
TUSC3-207ENST00000508446 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
TUSC3-207ENST00000508446 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
TUSC3-207ENST00000508446 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
TUSC3-207ENST00000508446 MYCNP04198 464 aaPredicted RBP15.39■□□□□ 0.05
TUSC3-207ENST00000508446 ZBTB22O15209 634 aa15.38■□□□□ 0.05
TUSC3-207ENST00000508446 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
TUSC3-207ENST00000508446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
TUSC3-207ENST00000508446 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
TUSC3-207ENST00000508446 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
TUSC3-207ENST00000508446 CAPN15O75808 1086 aa15.27■□□□□ 0.04
TUSC3-207ENST00000508446 APLP2Q06481 763 aa15.26■□□□□ 0.03
TUSC3-207ENST00000508446 DSG3P32926 999 aa15.17■□□□□ 0.02
TUSC3-207ENST00000508446 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
TUSC3-207ENST00000508446 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
TUSC3-207ENST00000508446 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
TUSC3-207ENST00000508446 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
TUSC3-207ENST00000508446 ABCB7O75027 752 aa14.97□□□□□ -0.01
TUSC3-207ENST00000508446 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
TUSC3-207ENST00000508446 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
TUSC3-207ENST00000508446 POLA2Q14181 598 aa14.85□□□□□ -0.03
TUSC3-207ENST00000508446 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
TUSC3-207ENST00000508446 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
TUSC3-207ENST00000508446 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
TUSC3-207ENST00000508446 FBLN2P98095 1184 aa14.35□□□□□ -0.11
TUSC3-207ENST00000508446 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
TUSC3-207ENST00000508446 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
TUSC3-207ENST00000508446 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
TUSC3-207ENST00000508446 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
TUSC3-207ENST00000508446 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
TUSC3-207ENST00000508446 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
TUSC3-207ENST00000508446 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
TUSC3-207ENST00000508446 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
TUSC3-207ENST00000508446 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
TUSC3-207ENST00000508446 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
TUSC3-207ENST00000508446 POTEHQ6S545 545 aa13.89□□□□□ -0.19
TUSC3-207ENST00000508446 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
TUSC3-207ENST00000508446 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
TUSC3-207ENST00000508446 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
TUSC3-207ENST00000508446 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.21
TUSC3-207ENST00000508446 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
TUSC3-207ENST00000508446 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
TUSC3-207ENST00000508446 PROM2Q8N271 834 aa13.65□□□□□ -0.22
TUSC3-207ENST00000508446 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
TUSC3-207ENST00000508446 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
TUSC3-207ENST00000508446 FKBP8Q14318 412 aa13.53□□□□□ -0.24
TUSC3-207ENST00000508446 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
TUSC3-207ENST00000508446 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
TUSC3-207ENST00000508446 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
TUSC3-207ENST00000508446 HAX1O00165 279 aa13.32□□□□□ -0.28
TUSC3-207ENST00000508446 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
TUSC3-207ENST00000508446 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
TUSC3-207ENST00000508446 EVX2Q03828 476 aa13.28□□□□□ -0.28
TUSC3-207ENST00000508446 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
TUSC3-207ENST00000508446 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
TUSC3-207ENST00000508446 MIER1Q8N108 512 aa13.14□□□□□ -0.31
TUSC3-207ENST00000508446 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
TUSC3-207ENST00000508446 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
TUSC3-207ENST00000508446 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
TUSC3-207ENST00000508446 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
TUSC3-207ENST00000508446 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
TUSC3-207ENST00000508446 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
TUSC3-207ENST00000508446 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
TUSC3-207ENST00000508446 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
TUSC3-207ENST00000508446 GABBR2O75899 941 aa12.96□□□□□ -0.33
TUSC3-207ENST00000508446 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
TUSC3-207ENST00000508446 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
TUSC3-207ENST00000508446 CLCN6P51797 869 aa12.91□□□□□ -0.34
TUSC3-207ENST00000508446 NUBP1P53384 320 aa12.91□□□□□ -0.34
TUSC3-207ENST00000508446 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
TUSC3-207ENST00000508446 TSPYL2Q9H2G4 693 aaPredicted RBP12.87□□□□□ -0.35
TUSC3-207ENST00000508446 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
TUSC3-207ENST00000508446 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms