RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 AEBP2Q6ZN18 517 aaPredicted RBP32.55■■■□□ 2.8
SCARB2-217ENST00000639324 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
SCARB2-217ENST00000639324 SENP3Q9H4L4 574 aaPredicted RBP27.58■■■□□ 2.01
SCARB2-217ENST00000639324 PHF23Q9BUL5 403 aaPredicted RBP27.29■■□□□ 1.96
SCARB2-217ENST00000639324 FOXD1Q16676 465 aa25.78■■□□□ 1.72
SCARB2-217ENST00000639324 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
SCARB2-217ENST00000639324 PPP6R1Q9UPN7 881 aa24.28■■□□□ 1.48
SCARB2-217ENST00000639324 ADRA2BP18089 450 aa24.16■■□□□ 1.46
SCARB2-217ENST00000639324 PIAS4Q8N2W9 510 aaPredicted RBP24.06■■□□□ 1.44
SCARB2-217ENST00000639324 MSH5O43196 834 aa23.95■■□□□ 1.42
SCARB2-217ENST00000639324 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
SCARB2-217ENST00000639324 MAPK8IP2Q13387 824 aaPredicted RBP22.17■■□□□ 1.14
SCARB2-217ENST00000639324 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
SCARB2-217ENST00000639324 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
SCARB2-217ENST00000639324 PPP4R3CPQ6ZMV5 832 aa21.74■■□□□ 1.07
SCARB2-217ENST00000639324 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
SCARB2-217ENST00000639324 HOXD11P31277 338 aaPredicted RBP21.21■□□□□ 0.99
SCARB2-217ENST00000639324 RNF216Q9NWF9 866 aaPredicted RBP21.05■□□□□ 0.96
SCARB2-217ENST00000639324 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
SCARB2-217ENST00000639324 NCBP3Q53F19 620 aaKnown RBP20.84■□□□□ 0.93
SCARB2-217ENST00000639324 NPM3O75607 178 aaKnown RBP20.68■□□□□ 0.9
SCARB2-217ENST00000639324 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
SCARB2-217ENST00000639324 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
SCARB2-217ENST00000639324 KCNA4P22459 653 aa20.44■□□□□ 0.86
SCARB2-217ENST00000639324 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
SCARB2-217ENST00000639324 C1QBPQ07021 282 aaKnown RBP20.17■□□□□ 0.82
SCARB2-217ENST00000639324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.81
SCARB2-217ENST00000639324 U3KPZ7 1027 aaPredicted RBP19.81■□□□□ 0.76
SCARB2-217ENST00000639324 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
SCARB2-217ENST00000639324 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
SCARB2-217ENST00000639324 CAPN15O75808 1086 aa19.35■□□□□ 0.69
SCARB2-217ENST00000639324 DSG3P32926 999 aa19.29■□□□□ 0.68
SCARB2-217ENST00000639324 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
SCARB2-217ENST00000639324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
SCARB2-217ENST00000639324 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
SCARB2-217ENST00000639324 TRHP20396 242 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-217ENST00000639324 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
SCARB2-217ENST00000639324 APLP2Q06481 763 aa19.07■□□□□ 0.64
SCARB2-217ENST00000639324 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
SCARB2-217ENST00000639324 ZNF219Q9P2Y4 722 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-217ENST00000639324 ABCB7O75027 752 aa18.98■□□□□ 0.63
SCARB2-217ENST00000639324 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
SCARB2-217ENST00000639324 ZBTB22O15209 634 aa18.87■□□□□ 0.61
SCARB2-217ENST00000639324 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
SCARB2-217ENST00000639324 POLA2Q14181 598 aa18.64■□□□□ 0.57
SCARB2-217ENST00000639324 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.52
SCARB2-217ENST00000639324 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
SCARB2-217ENST00000639324 POTEHQ6S545 545 aa18.2■□□□□ 0.5
SCARB2-217ENST00000639324 ZBTB12Q9Y330 459 aaPredicted RBP18.17■□□□□ 0.5
SCARB2-217ENST00000639324 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
SCARB2-217ENST00000639324 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
SCARB2-217ENST00000639324 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
SCARB2-217ENST00000639324 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
SCARB2-217ENST00000639324 MKRN4PQ13434 485 aaPredicted RBP17.87■□□□□ 0.45
SCARB2-217ENST00000639324 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
SCARB2-217ENST00000639324 REM2Q8IYK8 340 aaPredicted RBP17.81■□□□□ 0.44
SCARB2-217ENST00000639324 FBLN2P98095 1184 aa17.8■□□□□ 0.44
SCARB2-217ENST00000639324 SPDYE2BA6NHP3 402 aa17.68■□□□□ 0.42
SCARB2-217ENST00000639324 SPDYE6P0CI01 402 aa17.68■□□□□ 0.42
SCARB2-217ENST00000639324 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
SCARB2-217ENST00000639324 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
SCARB2-217ENST00000639324 PIP4P2Q8N4L2 257 aa17.54■□□□□ 0.4
SCARB2-217ENST00000639324 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
SCARB2-217ENST00000639324 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
SCARB2-217ENST00000639324 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCARB2-217ENST00000639324 SPDYE1Q8NFV5 336 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-217ENST00000639324 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
SCARB2-217ENST00000639324 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCARB2-217ENST00000639324 PRKAR2AP13861 404 aaKnown RBP17.14■□□□□ 0.33
SCARB2-217ENST00000639324 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-217ENST00000639324 HAX1O00165 279 aa17.1■□□□□ 0.33
SCARB2-217ENST00000639324 EVX2Q03828 476 aa17.06■□□□□ 0.32
SCARB2-217ENST00000639324 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
SCARB2-217ENST00000639324 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
SCARB2-217ENST00000639324 SPDYE4A6NLX3 237 aa17■□□□□ 0.31
SCARB2-217ENST00000639324 C19orf67A6NJJ6 358 aa16.89■□□□□ 0.29
SCARB2-217ENST00000639324 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-217ENST00000639324 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
SCARB2-217ENST00000639324 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
SCARB2-217ENST00000639324 PROM2Q8N271 834 aa16.7■□□□□ 0.26
SCARB2-217ENST00000639324 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
SCARB2-217ENST00000639324 GABBR2O75899 941 aa16.59■□□□□ 0.25
SCARB2-217ENST00000639324 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-217ENST00000639324 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
SCARB2-217ENST00000639324 ZNF579Q8NAF0 562 aaKnown RBP16.37■□□□□ 0.21
SCARB2-217ENST00000639324 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
SCARB2-217ENST00000639324 FKBP8Q14318 412 aa16.31■□□□□ 0.2
SCARB2-217ENST00000639324 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
SCARB2-217ENST00000639324 CLCN6P51797 869 aa16.26■□□□□ 0.19
SCARB2-217ENST00000639324 PHF12Q96QT6 1004 aa16.23■□□□□ 0.19
SCARB2-217ENST00000639324 GALR2O43603 387 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-217ENST00000639324 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
SCARB2-217ENST00000639324 MIER1Q8N108 512 aa16.15■□□□□ 0.18
SCARB2-217ENST00000639324 DCBLD2Q96PD2 775 aa16.09■□□□□ 0.17
SCARB2-217ENST00000639324 TSPYL2Q9H2G4 693 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-217ENST00000639324 LHX8Q68G74 356 aa16.05■□□□□ 0.16
SCARB2-217ENST00000639324 CCDC61Q9Y6R9 512 aa16.05■□□□□ 0.16
SCARB2-217ENST00000639324 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
SCARB2-217ENST00000639324 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
SCARB2-217ENST00000639324 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms