Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 KRT18P21-201ENST00000515767 1272 ntBASIC17.62■□□□□ 0.41
VPS13CQ709C8 AC097493.4-201ENST00000641197 219 ntBASIC17.62■□□□□ 0.41
VPS13CQ709C8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS13CQ709C8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS13CQ709C8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS13CQ709C8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS13CQ709C8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 OR7E47P-201ENST00000546390 1422 ntBASIC17.6■□□□□ 0.41
VPS13CQ709C8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
VPS13CQ709C8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS13CQ709C8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 CYP2T3P-201ENST00000601990 817 ntBASIC17.59■□□□□ 0.41
VPS13CQ709C8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS13CQ709C8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS13CQ709C8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
VPS13CQ709C8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS13CQ709C8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS13CQ709C8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS13CQ709C8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VPS13CQ709C8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS13CQ709C8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS13CQ709C8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS13CQ709C8 RN7SL850P-201ENST00000579959 291 ntBASIC17.58■□□□□ 0.4
VPS13CQ709C8 AL591742.1-201ENST00000604433 565 ntBASIC17.58■□□□□ 0.4
VPS13CQ709C8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS13CQ709C8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms