Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 IGHV3-19-201ENST00000521488 291 ntBASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRIF1Q5T3J3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRIF1Q5T3J3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRIF1Q5T3J3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LRIF1Q5T3J3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 AC121338.2-201ENST00000622535 1744 ntBASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.76■□□□□ 0.75
LRIF1Q5T3J3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.75■□□□□ 0.75
LRIF1Q5T3J3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 UNC93B3-201ENST00000308076 687 ntBASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 AL136116.3-201ENST00000402907 1138 ntBASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LRIF1Q5T3J3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LRIF1Q5T3J3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 AC005224.4-201ENST00000583262 1652 ntBASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 AC126544.1-201ENST00000580842 1059 ntBASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms