Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SH2D4BQ5SQS7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4BQ5SQS7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4BQ5SQS7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 AL049796.1-201ENST00000565336 1766 ntBASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 AL512631.2-201ENST00000604634 923 ntBASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 AC007952.6-201ENST00000573168 2673 ntBASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 AC003957.1-201ENST00000625108 2673 ntBASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH2D4BQ5SQS7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.67■□□□□ 0.9
SH2D4BQ5SQS7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH2D4BQ5SQS7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SH2D4BQ5SQS7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.64■□□□□ 0.9
SH2D4BQ5SQS7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
SH2D4BQ5SQS7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH2D4BQ5SQS7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
SH2D4BQ5SQS7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
SH2D4BQ5SQS7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SH2D4BQ5SQS7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.63■□□□□ 0.89
SH2D4BQ5SQS7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms