Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNFT1Q5M7Z0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 AC091799.1-201ENST00000422823 811 ntBASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 RNA5SP413-201ENST00000516373 109 ntBASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 AC083880.1-201ENST00000608266 535 ntBASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNFT1Q5M7Z0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 MYC-209ENST00000641252 345 ntBASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNFT1Q5M7Z0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.91■□□□□ 0.62
RNFT1Q5M7Z0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 FAM201B-201ENST00000458407 597 ntBASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNFT1Q5M7Z0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RNFT1Q5M7Z0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 AC245052.3-201ENST00000450182 901 ntBASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 AC091874.3-201ENST00000512672 1195 ntBASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNFT1Q5M7Z0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms