Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 PLK5-205ENST00000642079 1969 ntBASIC20.1■□□□□ 0.81
PDCD4Q53EL6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD4Q53EL6 AP005212.1-201ENST00000581547 1997 ntBASIC20.1■□□□□ 0.81
PDCD4Q53EL6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 AC133561.4-201ENST00000566112 224 ntBASIC20.09■□□□□ 0.81
PDCD4Q53EL6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD4Q53EL6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.08■□□□□ 0.81
PDCD4Q53EL6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.08■□□□□ 0.81
PDCD4Q53EL6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD4Q53EL6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD4Q53EL6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 BX842568.3-201ENST00000418104 571 ntBASIC20.06■□□□□ 0.8
PDCD4Q53EL6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD4Q53EL6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms