Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM60Q495X7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM60Q495X7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM60Q495X7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM60Q495X7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM60Q495X7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM60Q495X7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM60Q495X7 SOX15-203ENST00000570788 1093 ntBASIC23.18■■□□□ 1.3
TRIM60Q495X7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRIM60Q495X7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM60Q495X7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM60Q495X7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM60Q495X7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 AC137767.1-201ENST00000602918 1920 ntBASIC23.16■■□□□ 1.3
TRIM60Q495X7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM60Q495X7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIM60Q495X7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM60Q495X7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 CDV3P1-201ENST00000471403 739 ntBASIC23.15■■□□□ 1.3
TRIM60Q495X7 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.15■■□□□ 1.3
TRIM60Q495X7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 BX088651.1-201ENST00000540551 451 ntBASIC23.15■■□□□ 1.3
TRIM60Q495X7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM60Q495X7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM60Q495X7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM60Q495X7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIM60Q495X7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.14■■□□□ 1.3
TRIM60Q495X7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRIM60Q495X7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM60Q495X7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.14■■□□□ 1.29
TRIM60Q495X7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM60Q495X7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM60Q495X7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM60Q495X7 MCRIP2P1-201ENST00000394346 511 ntBASIC23.13■■□□□ 1.29
TRIM60Q495X7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM60Q495X7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM60Q495X7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TRIM60Q495X7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM60Q495X7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TRIM60Q495X7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms