Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01559Q495D7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01559Q495D7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01559Q495D7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01559Q495D7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01559Q495D7 AP005212.1-201ENST00000581547 1997 ntBASIC15.58■□□□□ 0.09
LINC01559Q495D7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 AP004607.7-201ENST00000527152 1677 ntBASIC15.58■□□□□ 0.08
LINC01559Q495D7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 AC099791.2-201ENST00000605725 427 ntBASIC15.58■□□□□ 0.08
LINC01559Q495D7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01559Q495D7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01559Q495D7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 MIR3181-201ENST00000578512 73 ntBASIC15.57■□□□□ 0.08
LINC01559Q495D7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC15.57■□□□□ 0.08
LINC01559Q495D7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01559Q495D7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01559Q495D7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 AL845331.1-201ENST00000424978 1190 ntBASIC15.56■□□□□ 0.08
LINC01559Q495D7 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 AP003400.6-201ENST00000624698 740 ntBASIC15.56■□□□□ 0.08
LINC01559Q495D7 CFTRP2-201ENST00000634304 199 ntBASIC15.56■□□□□ 0.08
LINC01559Q495D7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINC01559Q495D7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01559Q495D7 AC007952.6-201ENST00000573168 2673 ntBASIC15.55■□□□□ 0.08
LINC01559Q495D7 AC003957.1-201ENST00000625108 2673 ntBASIC15.55■□□□□ 0.08
LINC01559Q495D7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01559Q495D7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01559Q495D7 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 AC010326.4-201ENST00000604665 891 ntBASIC15.55■□□□□ 0.08
LINC01559Q495D7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC01559Q495D7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms