Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 AC008406.3-201ENST00000620001 1374 ntBASIC15.96■□□□□ 0.15
HIST1H1AQ02539 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H1AQ02539 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.96■□□□□ 0.14
HIST1H1AQ02539 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 FEM1AP4-201ENST00000443167 1987 ntBASIC15.95■□□□□ 0.14
HIST1H1AQ02539 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 AL136162.1-201ENST00000607711 1078 ntBASIC15.95■□□□□ 0.14
HIST1H1AQ02539 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H1AQ02539 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 AC126544.1-201ENST00000580842 1059 ntBASIC15.94■□□□□ 0.14
HIST1H1AQ02539 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H1AQ02539 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 BX842568.3-201ENST00000418104 571 ntBASIC15.93■□□□□ 0.14
HIST1H1AQ02539 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 AC024257.2-201ENST00000549699 147 ntBASIC15.93■□□□□ 0.14
HIST1H1AQ02539 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST1H1AQ02539 AC135279.3-201ENST00000610945 1311 ntBASIC15.93■□□□□ 0.14
HIST1H1AQ02539 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H1AQ02539 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms