Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.59■□□□□ 0.89
CDKL1Q00532 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL1Q00532 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL1Q00532 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL1Q00532 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL1Q00532 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKL1Q00532 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKL1Q00532 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKL1Q00532 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL1Q00532 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL1Q00532 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL1Q00532 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDKL1Q00532 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKL1Q00532 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDKL1Q00532 AC027612.3-201ENST00000413684 1047 ntBASIC20.58■□□□□ 0.89
CDKL1Q00532 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL1Q00532 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.58■□□□□ 0.88
CDKL1Q00532 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL1Q00532 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL1Q00532 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDKL1Q00532 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL1Q00532 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDKL1Q00532 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL1Q00532 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL1Q00532 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL1Q00532 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL1Q00532 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL1Q00532 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL1Q00532 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKL1Q00532 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL1Q00532 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDKL1Q00532 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL1Q00532 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.56■□□□□ 0.88
CDKL1Q00532 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL1Q00532 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL1Q00532 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDKL1Q00532 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL1Q00532 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL1Q00532 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL1Q00532 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL1Q00532 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL1Q00532 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL1Q00532 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDKL1Q00532 EEF1DP3-203ENST00000566025 782 ntBASIC20.55■□□□□ 0.88
CDKL1Q00532 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL1Q00532 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL1Q00532 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL1Q00532 MIR6084-201ENST00000622012 110 ntBASIC20.55■□□□□ 0.88
CDKL1Q00532 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL1Q00532 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDKL1Q00532 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL1Q00532 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.54■□□□□ 0.88
CDKL1Q00532 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL1Q00532 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDKL1Q00532 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL1Q00532 AC053503.5-201ENST00000601508 636 ntBASIC20.54■□□□□ 0.88
CDKL1Q00532 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKL1Q00532 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL1Q00532 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
CDKL1Q00532 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL1Q00532 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.53■□□□□ 0.88
CDKL1Q00532 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CDKL1Q00532 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDKL1Q00532 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDKL1Q00532 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKL1Q00532 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms