Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR4P61073 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CXCR4P61073 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR4P61073 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR4P61073 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 AC133637.1-201ENST00000624115 1537 ntBASIC19.1■□□□□ 0.65
CXCR4P61073 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.09■□□□□ 0.65
CXCR4P61073 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.09■□□□□ 0.65
CXCR4P61073 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CXCR4P61073 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CXCR4P61073 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.09■□□□□ 0.65
CXCR4P61073 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CXCR4P61073 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CXCR4P61073 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCR4P61073 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.09■□□□□ 0.65
CXCR4P61073 AC003102.1-202ENST00000563394 1796 ntBASIC19.09■□□□□ 0.65
CXCR4P61073 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCR4P61073 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCR4P61073 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.08■□□□□ 0.65
CXCR4P61073 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CXCR4P61073 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCR4P61073 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCR4P61073 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCR4P61073 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.08■□□□□ 0.65
CXCR4P61073 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.08■□□□□ 0.64
CXCR4P61073 AL451085.2-201ENST00000605085 799 ntBASIC19.08■□□□□ 0.64
CXCR4P61073 AC068587.7-201ENST00000641602 218 ntBASIC19.08■□□□□ 0.64
CXCR4P61073 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.08■□□□□ 0.64
CXCR4P61073 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 AL162377.1-201ENST00000618844 1793 ntBASIC19.08■□□□□ 0.64
CXCR4P61073 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.08■□□□□ 0.64
CXCR4P61073 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.08■□□□□ 0.64
CXCR4P61073 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCR4P61073 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.07■□□□□ 0.64
CXCR4P61073 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.07■□□□□ 0.64
CXCR4P61073 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 UNC93B8-201ENST00000511903 705 ntBASIC19.07■□□□□ 0.64
CXCR4P61073 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CXCR4P61073 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.07■□□□□ 0.64
CXCR4P61073 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CXCR4P61073 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.07■□□□□ 0.64
CXCR4P61073 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCR4P61073 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CXCR4P61073 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CXCR4P61073 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.07■□□□□ 0.64
CXCR4P61073 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CXCR4P61073 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.06■□□□□ 0.64
CXCR4P61073 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCR4P61073 SMG8-203ENST00000578922 2178 ntBASIC19.06■□□□□ 0.64
CXCR4P61073 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCR4P61073 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.06■□□□□ 0.64
CXCR4P61073 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCR4P61073 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCR4P61073 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.06■□□□□ 0.64
CXCR4P61073 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCR4P61073 AL034346.1-201ENST00000568244 1277 ntBASIC19.06■□□□□ 0.64
CXCR4P61073 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
CXCR4P61073 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCR4P61073 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CXCR4P61073 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CXCR4P61073 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCR4P61073 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCR4P61073 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCR4P61073 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CXCR4P61073 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCR4P61073 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCR4P61073 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms