Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A6P48664 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC1A6P48664 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC1A6P48664 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC1A6P48664 AP005435.1-201ENST00000529293 1178 ntBASIC20.59■□□□□ 0.89
SLC1A6P48664 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC1A6P48664 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC1A6P48664 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A6P48664 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A6P48664 AL391422.3-201ENST00000603791 2761 ntBASIC20.58■□□□□ 0.89
SLC1A6P48664 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A6P48664 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A6P48664 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A6P48664 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A6P48664 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A6P48664 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A6P48664 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.58■□□□□ 0.89
SLC1A6P48664 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A6P48664 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A6P48664 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A6P48664 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A6P48664 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC1A6P48664 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC1A6P48664 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.57■□□□□ 0.88
SLC1A6P48664 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC1A6P48664 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC1A6P48664 AC121338.2-201ENST00000622535 1744 ntBASIC20.57■□□□□ 0.88
SLC1A6P48664 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A6P48664 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC1A6P48664 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A6P48664 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC1A6P48664 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC1A6P48664 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SLC1A6P48664 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A6P48664 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC1A6P48664 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A6P48664 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC1A6P48664 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A6P48664 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A6P48664 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A6P48664 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A6P48664 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 AC027702.1-201ENST00000563810 1770 ntBASIC20.55■□□□□ 0.88
SLC1A6P48664 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC1A6P48664 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A6P48664 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A6P48664 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC1A6P48664 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A6P48664 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A6P48664 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC1A6P48664 PCDHAC2-203ENST00000615316 3011 ntBASIC20.54■□□□□ 0.88
SLC1A6P48664 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A6P48664 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC1A6P48664 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A6P48664 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A6P48664 AL138724.1-201ENST00000606771 1088 ntBASIC20.54■□□□□ 0.88
SLC1A6P48664 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A6P48664 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A6P48664 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A6P48664 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A6P48664 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A6P48664 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A6P48664 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A6P48664 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms