Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SHC1P29353 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC1P29353 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.17■□□□□ 0.66
SHC1P29353 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.17■□□□□ 0.66
SHC1P29353 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.17■□□□□ 0.66
SHC1P29353 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC1P29353 AC244015.2-201ENST00000616358 1861 ntBASIC19.17■□□□□ 0.66
SHC1P29353 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
SHC1P29353 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC1P29353 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SHC1P29353 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SHC1P29353 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC1P29353 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC1P29353 AL162430.1-201ENST00000480705 870 ntBASIC19.16■□□□□ 0.66
SHC1P29353 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC1P29353 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SHC1P29353 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC1P29353 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 AC004854.2-201ENST00000608450 1441 ntBASIC19.16■□□□□ 0.66
SHC1P29353 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC1P29353 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.15■□□□□ 0.66
SHC1P29353 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
SHC1P29353 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SHC1P29353 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.15■□□□□ 0.66
SHC1P29353 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SHC1P29353 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC1P29353 KRT18P5-201ENST00000436075 1291 ntBASIC19.15■□□□□ 0.66
SHC1P29353 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC1P29353 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.15■□□□□ 0.66
SHC1P29353 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC1P29353 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SHC1P29353 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC1P29353 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC1P29353 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SHC1P29353 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHC1P29353 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHC1P29353 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHC1P29353 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.14■□□□□ 0.65
SHC1P29353 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.14■□□□□ 0.65
SHC1P29353 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.14■□□□□ 0.65
SHC1P29353 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.14■□□□□ 0.65
SHC1P29353 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.14■□□□□ 0.65
SHC1P29353 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.14■□□□□ 0.65
SHC1P29353 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.14■□□□□ 0.65
SHC1P29353 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SHC1P29353 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 AP004607.4-201ENST00000530158 1459 ntBASIC19.14■□□□□ 0.65
SHC1P29353 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.14■□□□□ 0.65
SHC1P29353 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHC1P29353 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SHC1P29353 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SHC1P29353 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms