Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC092667.1-201ENST00000434301 2586 ntBASIC18.17■□□□□ 0.5
ACKR3P25106 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.17■□□□□ 0.5
ACKR3P25106 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.17■□□□□ 0.5
ACKR3P25106 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.17■□□□□ 0.5
ACKR3P25106 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.17■□□□□ 0.5
ACKR3P25106 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.17■□□□□ 0.5
ACKR3P25106 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.17■□□□□ 0.5
ACKR3P25106 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.17■□□□□ 0.5
ACKR3P25106 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ACKR3P25106 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.16■□□□□ 0.5
ACKR3P25106 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ACKR3P25106 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ACKR3P25106 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.16■□□□□ 0.5
ACKR3P25106 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.16■□□□□ 0.5
ACKR3P25106 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.16■□□□□ 0.5
ACKR3P25106 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.16■□□□□ 0.5
ACKR3P25106 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.16■□□□□ 0.5
ACKR3P25106 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.16■□□□□ 0.5
ACKR3P25106 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACKR3P25106 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.16■□□□□ 0.5
ACKR3P25106 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ACKR3P25106 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.15■□□□□ 0.5
ACKR3P25106 AL049796.1-201ENST00000565336 1766 ntBASIC18.15■□□□□ 0.5
ACKR3P25106 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ACKR3P25106 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.15■□□□□ 0.5
ACKR3P25106 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.15■□□□□ 0.5
ACKR3P25106 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.15■□□□□ 0.5
ACKR3P25106 TPRG1LP1-201ENST00000598702 760 ntBASIC18.15■□□□□ 0.5
ACKR3P25106 AL354811.1-201ENST00000610286 706 ntBASIC18.15■□□□□ 0.5
ACKR3P25106 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.15■□□□□ 0.5
ACKR3P25106 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.15■□□□□ 0.5
ACKR3P25106 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 AC073130.3-201ENST00000624389 2278 ntBASIC18.15■□□□□ 0.5
ACKR3P25106 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACKR3P25106 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.15■□□□□ 0.5
ACKR3P25106 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.15■□□□□ 0.5
ACKR3P25106 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ACKR3P25106 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ACKR3P25106 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.14■□□□□ 0.49
ACKR3P25106 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.14■□□□□ 0.49
ACKR3P25106 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 MIR638-201ENST00000385237 100 ntBASIC18.14■□□□□ 0.49
ACKR3P25106 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
ACKR3P25106 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.14■□□□□ 0.49
ACKR3P25106 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.14■□□□□ 0.49
ACKR3P25106 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.14■□□□□ 0.49
ACKR3P25106 MIR6084-201ENST00000622012 110 ntBASIC18.14■□□□□ 0.49
ACKR3P25106 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.14■□□□□ 0.49
ACKR3P25106 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
ACKR3P25106 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACKR3P25106 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.13■□□□□ 0.49
ACKR3P25106 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ACKR3P25106 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ACKR3P25106 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.13■□□□□ 0.49
ACKR3P25106 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACKR3P25106 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.13■□□□□ 0.49
ACKR3P25106 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms