Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
CXCL3P19876 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CXCL3P19876 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.61■□□□□ 0.41
CXCL3P19876 LONRF2P2-201ENST00000439212 571 ntBASIC17.61■□□□□ 0.41
CXCL3P19876 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.61■□□□□ 0.41
CXCL3P19876 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CXCL3P19876 AC018755.3-202ENST00000596210 929 ntBASIC17.61■□□□□ 0.41
CXCL3P19876 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.61■□□□□ 0.41
CXCL3P19876 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CXCL3P19876 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.61■□□□□ 0.41
CXCL3P19876 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CXCL3P19876 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CXCL3P19876 AF131216.4-201ENST00000638924 1588 ntBASIC17.61■□□□□ 0.41
CXCL3P19876 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL3P19876 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL3P19876 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL3P19876 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CXCL3P19876 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.6■□□□□ 0.41
CXCL3P19876 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CXCL3P19876 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL3P19876 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CXCL3P19876 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL3P19876 NEFHP1-201ENST00000412845 2629 ntBASIC17.6■□□□□ 0.41
CXCL3P19876 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
CXCL3P19876 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.6■□□□□ 0.41
CXCL3P19876 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CXCL3P19876 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCL3P19876 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CXCL3P19876 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CXCL3P19876 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CXCL3P19876 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.59■□□□□ 0.41
CXCL3P19876 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CXCL3P19876 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.59■□□□□ 0.41
CXCL3P19876 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 SPCS2P3-201ENST00000500401 656 ntBASIC17.59■□□□□ 0.41
CXCL3P19876 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL3P19876 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCL3P19876 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCL3P19876 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CXCL3P19876 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCL3P19876 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CXCL3P19876 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL3P19876 DUX4L4-201ENST00000566884 1269 ntBASIC17.58■□□□□ 0.4
CXCL3P19876 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CXCL3P19876 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CXCL3P19876 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CXCL3P19876 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL3P19876 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.58■□□□□ 0.4
CXCL3P19876 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.58■□□□□ 0.4
CXCL3P19876 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL3P19876 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL3P19876 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.57■□□□□ 0.4
CXCL3P19876 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.57■□□□□ 0.4
CXCL3P19876 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CXCL3P19876 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.57■□□□□ 0.4
CXCL3P19876 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CXCL3P19876 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CXCL3P19876 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL3P19876 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms