Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PDE6GP18545 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13□□□□□ -0.33
PDE6GP18545 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
PDE6GP18545 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PDE6GP18545 ECEL1P2-201ENST00000461596 1295 ntBASIC13□□□□□ -0.33
PDE6GP18545 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC13□□□□□ -0.33
PDE6GP18545 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PDE6GP18545 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13□□□□□ -0.33
PDE6GP18545 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13□□□□□ -0.33
PDE6GP18545 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PDE6GP18545 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6GP18545 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
PDE6GP18545 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PDE6GP18545 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6GP18545 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6GP18545 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC12.99□□□□□ -0.33
PDE6GP18545 AC026202.3-201ENST00000600805 1127 ntBASIC12.99□□□□□ -0.33
PDE6GP18545 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6GP18545 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6GP18545 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6GP18545 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.99□□□□□ -0.33
PDE6GP18545 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6GP18545 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 LBH-205ENST00000407930 756 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6GP18545 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PDE6GP18545 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 AC073314.1-201ENST00000568729 2216 ntBASIC12.98□□□□□ -0.33
PDE6GP18545 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6GP18545 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PDE6GP18545 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6GP18545 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC12.97□□□□□ -0.33
PDE6GP18545 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
PDE6GP18545 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PDE6GP18545 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6GP18545 RPS2P7-201ENST00000447334 885 ntBASIC12.97□□□□□ -0.33
PDE6GP18545 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms