Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HOXB3P14651 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXB3P14651 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXB3P14651 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HOXB3P14651 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXB3P14651 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXB3P14651 AP006587.3-201ENST00000525742 1516 ntBASIC20.53■□□□□ 0.88
HOXB3P14651 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXB3P14651 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 AC007322.1-201ENST00000426983 750 ntBASIC20.53■□□□□ 0.88
HOXB3P14651 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HOXB3P14651 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.53■□□□□ 0.88
HOXB3P14651 UNC93B4-201ENST00000505679 747 ntBASIC20.53■□□□□ 0.88
HOXB3P14651 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXB3P14651 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXB3P14651 AC005181.1-201ENST00000604782 1256 ntBASIC20.53■□□□□ 0.88
HOXB3P14651 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXB3P14651 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXB3P14651 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HOXB3P14651 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HOXB3P14651 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.52■□□□□ 0.88
HOXB3P14651 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXB3P14651 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXB3P14651 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXB3P14651 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXB3P14651 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXB3P14651 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
HOXB3P14651 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXB3P14651 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXB3P14651 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
HOXB3P14651 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
HOXB3P14651 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
HOXB3P14651 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HOXB3P14651 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXB3P14651 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXB3P14651 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HOXB3P14651 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXB3P14651 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXB3P14651 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXB3P14651 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXB3P14651 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
HOXB3P14651 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXB3P14651 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXB3P14651 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXB3P14651 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXB3P14651 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HOXB3P14651 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXB3P14651 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HOXB3P14651 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HOXB3P14651 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXB3P14651 CNN2P6-201ENST00000439038 900 ntBASIC20.5■□□□□ 0.87
HOXB3P14651 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXB3P14651 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXB3P14651 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
HOXB3P14651 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXB3P14651 EEF1DP3-203ENST00000566025 782 ntBASIC20.5■□□□□ 0.87
HOXB3P14651 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HOXB3P14651 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXB3P14651 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXB3P14651 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXB3P14651 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXB3P14651 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HOXB3P14651 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXB3P14651 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXB3P14651 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXB3P14651 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXB3P14651 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXB3P14651 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXB3P14651 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXB3P14651 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXB3P14651 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms