Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 HNRNPA3-203ENST00000432457 643 ntTSL 310.99□□□□□ -0.652e-6■□□□□ 10.8
XRCC6P12956 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)22.76■■□□□ 1.231e-6■□□□□ 10.8
XRCC6P12956 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)24.26■■□□□ 1.473e-7■□□□□ 10.7
XRCC6P12956 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.63e-7■□□□□ 10.7
XRCC6P12956 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)18.12■□□□□ 0.493e-7■□□□□ 10.7
XRCC6P12956 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.52■□□□□ 0.083e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.063e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.17□□□□□ -0.143e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC13.26□□□□□ -0.293e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-231ENST00000557336 580 ntTSL 312.39□□□□□ -0.433e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.483e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC11.88□□□□□ -0.513e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-232ENST00000557442 1308 ntTSL 211.79□□□□□ -0.523e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-213ENST00000554891 644 ntTSL 511.78□□□□□ -0.523e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC11.75□□□□□ -0.533e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC11.47□□□□□ -0.573e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC11.4□□□□□ -0.583e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC11.39□□□□□ -0.593e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-218ENST00000555215 781 ntTSL 511.16□□□□□ -0.623e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-209ENST00000554383 1039 ntTSL 511.16□□□□□ -0.623e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.96□□□□□ -0.653e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-224ENST00000556226 629 ntTSL 510.93□□□□□ -0.663e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC10.88□□□□□ -0.673e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-216ENST00000555137 789 ntTSL 310.64□□□□□ -0.713e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.713e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.823e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-207ENST00000553614 604 ntTSL 59.95□□□□□ -0.823e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-212ENST00000554539 748 ntTSL 59.32□□□□□ -0.923e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.55□□□□□ -1.043e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-233ENST00000557768 599 ntTSL 35.85□□□□□ -1.473e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-217ENST00000555176 531 ntTSL 54.19□□□□□ -1.743e-6■□□□□ 10.7
XRCC6P12956 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.743e-6■□□□□ 10.7
XRCC6P12956 TMC6-219ENST00000591594 614 ntTSL 318.7■□□□□ 0.586e-19■□□□□ 10.7
XRCC6P12956 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 217.65■□□□□ 0.424e-6■□□□□ 10.7
XRCC6P12956 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC14.12□□□□□ -0.154e-6■□□□□ 10.7
XRCC6P12956 STAG3L5P-PVRIG2P-PILRB-204ENST00000472646 553 ntTSL 512.71□□□□□ -0.374e-6■□□□□ 10.7
XRCC6P12956 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.343e-6■□□□□ 10.7
XRCC6P12956 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.024e-6■□□□□ 10.7
XRCC6P12956 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.06□□□□□ -1.124e-6■□□□□ 10.7
XRCC6P12956 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.132e-8■□□□□ 10.7
XRCC6P12956 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.632e-8■□□□□ 10.7
XRCC6P12956 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.022e-8■□□□□ 10.7
XRCC6P12956 RNU6-9-201ENST00000384776 107 ntBASIC3.46□□□□□ -1.863e-12■□□□□ 10.7
XRCC6P12956 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.33e-8■□□□□ 10.7
XRCC6P12956 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.93■■□□□ 1.423e-8■□□□□ 10.7
XRCC6P12956 CCNL2-213ENST00000481223 2815 ntTSL 223.17■■□□□ 1.33e-8■□□□□ 10.7
XRCC6P12956 ACAP3-213ENST00000493992 326 ntTSL 522.83■■□□□ 1.254e-6■□□□□ 10.7
XRCC6P12956 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.193e-8■□□□□ 10.7
XRCC6P12956 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.23■□□□□ 0.833e-8■□□□□ 10.7
XRCC6P12956 ACAP3-204ENST00000379037 492 ntTSL 318.85■□□□□ 0.614e-6■□□□□ 10.7
XRCC6P12956 CCNL2-215ENST00000482621 2059 ntTSL 218.51■□□□□ 0.553e-8■□□□□ 10.7
XRCC6P12956 ACAP3-209ENST00000476572 819 ntTSL 517.77■□□□□ 0.444e-6■□□□□ 10.7
XRCC6P12956 CCNL2-206ENST00000463260 1941 ntTSL 1 (best)17.64■□□□□ 0.423e-8■□□□□ 10.7
XRCC6P12956 CCNL2-220ENST00000505849 1503 ntTSL 217.59■□□□□ 0.413e-8■□□□□ 10.7
XRCC6P12956 CCNL2-218ENST00000496007 4452 ntTSL 216.84■□□□□ 0.293e-8■□□□□ 10.7
XRCC6P12956 CCNL2-214ENST00000482365 2620 ntTSL 216.55■□□□□ 0.243e-8■□□□□ 10.7
XRCC6P12956 CCNL2-211ENST00000480479 2792 ntTSL 215.51■□□□□ 0.073e-8■□□□□ 10.7
XRCC6P12956 CCNL2-204ENST00000418865 3082 ntTSL 1 (best)13.6□□□□□ -0.233e-8■□□□□ 10.7
XRCC6P12956 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.763e-8■□□□□ 10.7
XRCC6P12956 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.44□□□□□ -1.383e-8■□□□□ 10.7
XRCC6P12956 ARHGAP4-224ENST00000494813 1939 ntTSL 526.06■■□□□ 1.764e-7■□□□□ 10.7
XRCC6P12956 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.324e-7■□□□□ 10.7
XRCC6P12956 NAA10-211ENST00000477750 1062 ntTSL 222.68■■□□□ 1.224e-7■□□□□ 10.7
XRCC6P12956 NAA10-206ENST00000432089 599 ntTSL 321.38■■□□□ 1.014e-7■□□□□ 10.7
XRCC6P12956 NAA10-210ENST00000467451 743 ntTSL 220.6■□□□□ 0.894e-7■□□□□ 10.7
XRCC6P12956 NAA10-207ENST00000460996 908 ntTSL 219.91■□□□□ 0.784e-7■□□□□ 10.7
XRCC6P12956 NAA10-209ENST00000466877 1080 ntTSL 1 (best)19.8■□□□□ 0.764e-7■□□□□ 10.7
XRCC6P12956 NAA10-215ENST00000484950 873 ntTSL 217.04■□□□□ 0.324e-7■□□□□ 10.7
XRCC6P12956 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.81■□□□□ 0.284e-7■□□□□ 10.7
XRCC6P12956 NAA10-202ENST00000370011 538 ntTSL 516.81■□□□□ 0.284e-7■□□□□ 10.7
XRCC6P12956 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.81■□□□□ 0.284e-7■□□□□ 10.7
XRCC6P12956 NAA10-204ENST00000393710 525 ntTSL 216.81■□□□□ 0.284e-7■□□□□ 10.7
XRCC6P12956 NAA10-212ENST00000477882 809 ntTSL 216.66■□□□□ 0.264e-7■□□□□ 10.7
XRCC6P12956 NAA10-205ENST00000393712 908 ntTSL 5 BASIC14.2□□□□□ -0.144e-7■□□□□ 10.7
XRCC6P12956 CHTF18-203ENST00000426047 790 ntTSL 318.33■□□□□ 0.521e-9■□□□□ 10.6
XRCC6P12956 CHTF18-211ENST00000491530 819 ntTSL 517.2■□□□□ 0.341e-9■□□□□ 10.6
XRCC6P12956 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.81e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.761e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.031e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.891e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-207ENST00000361140 2701 ntTSL 1 (best)19.31■□□□□ 0.681e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.631e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-218ENST00000454523 810 ntAPPRIS ALT2 TSL 218.9■□□□□ 0.621e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-217ENST00000443231 932 ntAPPRIS ALT2 TSL 317.78■□□□□ 0.441e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.321e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-221ENST00000476093 1037 ntTSL 316.51■□□□□ 0.231e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.141e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-220ENST00000476027 927 ntTSL 315.51■□□□□ 0.071e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.291e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-204ENST00000354691 2498 ntTSL 212□□□□□ -0.491e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-215ENST00000436865 2684 ntTSL 1 (best)11.25□□□□□ -0.611e-8■□□□□ 10.6
XRCC6P12956 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.671e-8■□□□□ 10.6
XRCC6P12956 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.3■■□□□ 1.642e-10■□□□□ 10.6
XRCC6P12956 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)22.3■■□□□ 1.162e-10■□□□□ 10.6
XRCC6P12956 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.99□□□□□ -0.812e-10■□□□□ 10.6
XRCC6P12956 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23■■□□□ 1.277e-8■□□□□ 10.6
XRCC6P12956 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.077e-8■□□□□ 10.6
XRCC6P12956 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.047e-8■□□□□ 10.6
XRCC6P12956 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.7■□□□□ 0.97e-8■□□□□ 10.6
XRCC6P12956 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.84■□□□□ 0.777e-8■□□□□ 10.6
Retrieved 100 of 6,788 protein–RNA pairs in 46.4 ms