Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RARAP10276 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.99■■□□□ 1.11
RARAP10276 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.99■■□□□ 1.11
RARAP10276 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RARAP10276 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.99■■□□□ 1.11
RARAP10276 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.99■■□□□ 1.11
RARAP10276 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RARAP10276 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RARAP10276 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.99■■□□□ 1.11
RARAP10276 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.99■■□□□ 1.11
RARAP10276 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RARAP10276 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RARAP10276 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RARAP10276 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.98■■□□□ 1.11
RARAP10276 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.98■■□□□ 1.11
RARAP10276 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 AC092667.1-201ENST00000434301 2586 ntBASIC21.98■■□□□ 1.11
RARAP10276 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.98■■□□□ 1.11
RARAP10276 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.98■■□□□ 1.11
RARAP10276 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RARAP10276 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.97■■□□□ 1.11
RARAP10276 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RARAP10276 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RARAP10276 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.97■■□□□ 1.11
RARAP10276 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RARAP10276 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RARAP10276 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RARAP10276 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RARAP10276 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RARAP10276 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.96■■□□□ 1.11
RARAP10276 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RARAP10276 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.96■■□□□ 1.11
RARAP10276 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RARAP10276 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.95■■□□□ 1.11
RARAP10276 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.95■■□□□ 1.1
RARAP10276 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.95■■□□□ 1.1
RARAP10276 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.95■■□□□ 1.1
RARAP10276 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.95■■□□□ 1.1
RARAP10276 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.95■■□□□ 1.1
RARAP10276 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.95■■□□□ 1.1
RARAP10276 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 LINC01521-201ENST00000504184 1943 ntBASIC21.95■■□□□ 1.1
RARAP10276 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.95■■□□□ 1.1
RARAP10276 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RARAP10276 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RARAP10276 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RARAP10276 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARAP10276 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.94■■□□□ 1.1
RARAP10276 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARAP10276 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.94■■□□□ 1.1
RARAP10276 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RARAP10276 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.94■■□□□ 1.1
RARAP10276 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.94■■□□□ 1.1
RARAP10276 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.94■■□□□ 1.1
RARAP10276 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RARAP10276 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.93■■□□□ 1.1
RARAP10276 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.93■■□□□ 1.1
RARAP10276 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.93■■□□□ 1.1
RARAP10276 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.93■■□□□ 1.1
RARAP10276 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms