Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.73■■□□□ 1.39
CYP3A4P08684 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CYP3A4P08684 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CYP3A4P08684 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.72■■□□□ 1.39
CYP3A4P08684 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CYP3A4P08684 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.72■■□□□ 1.39
CYP3A4P08684 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.72■■□□□ 1.39
CYP3A4P08684 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.72■■□□□ 1.39
CYP3A4P08684 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CYP3A4P08684 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.71■■□□□ 1.39
CYP3A4P08684 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CYP3A4P08684 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.71■■□□□ 1.39
CYP3A4P08684 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.71■■□□□ 1.39
CYP3A4P08684 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP3A4P08684 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CYP3A4P08684 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.71■■□□□ 1.39
CYP3A4P08684 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CYP3A4P08684 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CYP3A4P08684 AC068338.2-201ENST00000563278 1430 ntBASIC23.7■■□□□ 1.38
CYP3A4P08684 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CYP3A4P08684 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CYP3A4P08684 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.7■■□□□ 1.38
CYP3A4P08684 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.7■■□□□ 1.38
CYP3A4P08684 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CYP3A4P08684 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.7■■□□□ 1.38
CYP3A4P08684 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.7■■□□□ 1.38
CYP3A4P08684 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CYP3A4P08684 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.69■■□□□ 1.38
CYP3A4P08684 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.69■■□□□ 1.38
CYP3A4P08684 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CYP3A4P08684 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CYP3A4P08684 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CYP3A4P08684 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CYP3A4P08684 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.69■■□□□ 1.38
CYP3A4P08684 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.69■■□□□ 1.38
CYP3A4P08684 AC245052.3-201ENST00000450182 901 ntBASIC23.69■■□□□ 1.38
CYP3A4P08684 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CYP3A4P08684 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.69■■□□□ 1.38
CYP3A4P08684 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
CYP3A4P08684 AL050303.2-201ENST00000619798 666 ntBASIC23.69■■□□□ 1.38
CYP3A4P08684 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.69■■□□□ 1.38
CYP3A4P08684 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.69■■□□□ 1.38
CYP3A4P08684 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.69■■□□□ 1.38
CYP3A4P08684 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
CYP3A4P08684 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.68■■□□□ 1.38
CYP3A4P08684 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.68■■□□□ 1.38
CYP3A4P08684 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 AC091799.1-201ENST00000422823 811 ntBASIC23.68■■□□□ 1.38
CYP3A4P08684 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.68■■□□□ 1.38
CYP3A4P08684 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CYP3A4P08684 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CYP3A4P08684 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CYP3A4P08684 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.67■■□□□ 1.38
CYP3A4P08684 Z98882.1-201ENST00000622160 2253 ntBASIC23.67■■□□□ 1.38
CYP3A4P08684 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.67■■□□□ 1.38
CYP3A4P08684 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CYP3A4P08684 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CYP3A4P08684 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.67■■□□□ 1.38
CYP3A4P08684 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CYP3A4P08684 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CYP3A4P08684 AL162412.1-201ENST00000567129 965 ntBASIC23.67■■□□□ 1.38
CYP3A4P08684 AC005181.1-201ENST00000604782 1256 ntBASIC23.67■■□□□ 1.38
CYP3A4P08684 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CYP3A4P08684 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.66■■□□□ 1.38
CYP3A4P08684 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CYP3A4P08684 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.66■■□□□ 1.38
CYP3A4P08684 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 MIR663A-201ENST00000385250 93 ntBASIC23.66■■□□□ 1.38
CYP3A4P08684 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.66■■□□□ 1.38
CYP3A4P08684 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.66■■□□□ 1.38
CYP3A4P08684 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.66■■□□□ 1.38
CYP3A4P08684 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CYP3A4P08684 LINC00565-201ENST00000562710 2331 ntBASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms