Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PMPCBO75439 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.28■■□□□ 1
PMPCBO75439 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMPCBO75439 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.28■■□□□ 1
PMPCBO75439 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMPCBO75439 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.27■■□□□ 1
PMPCBO75439 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PMPCBO75439 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PMPCBO75439 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.27■■□□□ 1
PMPCBO75439 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.27■■□□□ 1
PMPCBO75439 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.27■■□□□ 1
PMPCBO75439 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.27■■□□□ 1
PMPCBO75439 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PMPCBO75439 AC104187.1-201ENST00000607510 612 ntBASIC21.27■■□□□ 1
PMPCBO75439 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.27■■□□□ 1
PMPCBO75439 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
PMPCBO75439 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PMPCBO75439 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PMPCBO75439 AC061975.6-201ENST00000579045 1553 ntBASIC21.27■□□□□ 0.99
PMPCBO75439 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.27■□□□□ 0.99
PMPCBO75439 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PMPCBO75439 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.26■□□□□ 0.99
PMPCBO75439 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 AC097381.1-201ENST00000429019 1296 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
PMPCBO75439 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L2-201ENST00000561772 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.26■□□□□ 0.99
PMPCBO75439 AC087623.3-201ENST00000607047 1098 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L6-201ENST00000626483 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L1-201ENST00000627662 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L8-201ENST00000629013 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L3-201ENST00000630187 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L7-201ENST00000630678 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 DUX4L5-201ENST00000630834 1275 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PMPCBO75439 AC004854.2-201ENST00000608450 1441 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.26■□□□□ 0.99
PMPCBO75439 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMPCBO75439 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.25■□□□□ 0.99
PMPCBO75439 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.25■□□□□ 0.99
PMPCBO75439 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.25■□□□□ 0.99
PMPCBO75439 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.25■□□□□ 0.99
PMPCBO75439 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.25■□□□□ 0.99
PMPCBO75439 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.25■□□□□ 0.99
PMPCBO75439 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.25■□□□□ 0.99
PMPCBO75439 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.25■□□□□ 0.99
PMPCBO75439 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
PMPCBO75439 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMPCBO75439 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMPCBO75439 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMPCBO75439 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMPCBO75439 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.24■□□□□ 0.99
PMPCBO75439 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.24■□□□□ 0.99
PMPCBO75439 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.24■□□□□ 0.99
PMPCBO75439 MIR6821-201ENST00000617625 74 ntBASIC21.24■□□□□ 0.99
PMPCBO75439 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PMPCBO75439 AP004607.4-201ENST00000530158 1459 ntBASIC21.24■□□□□ 0.99
PMPCBO75439 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMPCBO75439 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMPCBO75439 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.24■□□□□ 0.99
PMPCBO75439 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
PMPCBO75439 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMPCBO75439 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.23■□□□□ 0.99
PMPCBO75439 AC138907.5-202ENST00000569484 235 ntBASIC21.23■□□□□ 0.99
PMPCBO75439 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMPCBO75439 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.23■□□□□ 0.99
PMPCBO75439 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
PMPCBO75439 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PMPCBO75439 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms