Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.35■■□□□ 1.01
PRAMEF11O60813 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PRAMEF11O60813 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.35■■□□□ 1.01
PRAMEF11O60813 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF11O60813 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF11O60813 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
PRAMEF11O60813 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF11O60813 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF11O60813 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF11O60813 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF11O60813 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.33■■□□□ 1.01
PRAMEF11O60813 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF11O60813 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
PRAMEF11O60813 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.32■■□□□ 1
PRAMEF11O60813 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.32■■□□□ 1
PRAMEF11O60813 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.32■■□□□ 1
PRAMEF11O60813 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.32■■□□□ 1
PRAMEF11O60813 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF11O60813 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.32■■□□□ 1
PRAMEF11O60813 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
PRAMEF11O60813 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.32■■□□□ 1
PRAMEF11O60813 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.32■■□□□ 1
PRAMEF11O60813 AC092666.2-201ENST00000613287 246 ntBASIC21.32■■□□□ 1
PRAMEF11O60813 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF11O60813 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF11O60813 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF11O60813 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.32■■□□□ 1
PRAMEF11O60813 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF11O60813 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF11O60813 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF11O60813 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF11O60813 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 AC026310.3-201ENST00000625186 2373 ntBASIC21.31■■□□□ 1
PRAMEF11O60813 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF11O60813 MFSD11-216ENST00000590393 1141 ntBASIC21.31■■□□□ 1
PRAMEF11O60813 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF11O60813 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.31■■□□□ 1
PRAMEF11O60813 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF11O60813 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.31■■□□□ 1
PRAMEF11O60813 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 AL137784.2-201ENST00000607332 1000 ntBASIC21.3■■□□□ 1
PRAMEF11O60813 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.3■■□□□ 1
PRAMEF11O60813 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PRAMEF11O60813 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.3■■□□□ 1
PRAMEF11O60813 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF11O60813 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF11O60813 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 AL024507.2-201ENST00000606070 2574 ntBASIC21.29■■□□□ 1
PRAMEF11O60813 FEM1AP4-201ENST00000443167 1987 ntBASIC21.29■■□□□ 1
PRAMEF11O60813 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.29■■□□□ 1
PRAMEF11O60813 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.29■■□□□ 1
PRAMEF11O60813 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.29■■□□□ 1
PRAMEF11O60813 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.29■■□□□ 1
PRAMEF11O60813 AC011767.1-201ENST00000617410 1153 ntBASIC21.29■■□□□ 1
PRAMEF11O60813 BID-214ENST00000617586 542 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF11O60813 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.29■■□□□ 1
PRAMEF11O60813 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF11O60813 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms