Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.45■□□□□ 0.86
NPHS1O60500 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.45■□□□□ 0.86
NPHS1O60500 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NPHS1O60500 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
NPHS1O60500 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NPHS1O60500 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHS1O60500 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHS1O60500 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHS1O60500 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHS1O60500 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPHS1O60500 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHS1O60500 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.44■□□□□ 0.86
NPHS1O60500 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHS1O60500 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHS1O60500 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NPHS1O60500 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHS1O60500 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHS1O60500 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
NPHS1O60500 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NPHS1O60500 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHS1O60500 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHS1O60500 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 AC055733.4-201ENST00000638462 1354 ntBASIC20.43■□□□□ 0.86
NPHS1O60500 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHS1O60500 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHS1O60500 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.42■□□□□ 0.86
NPHS1O60500 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.42■□□□□ 0.86
NPHS1O60500 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.42■□□□□ 0.86
NPHS1O60500 AC233992.3-201ENST00000607491 485 ntBASIC20.42■□□□□ 0.86
NPHS1O60500 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.42■□□□□ 0.86
NPHS1O60500 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPHS1O60500 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.42■□□□□ 0.86
NPHS1O60500 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPHS1O60500 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.42■□□□□ 0.86
NPHS1O60500 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPHS1O60500 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.41■□□□□ 0.86
NPHS1O60500 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.41■□□□□ 0.86
NPHS1O60500 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPHS1O60500 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
NPHS1O60500 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPHS1O60500 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.41■□□□□ 0.86
NPHS1O60500 MIR4767-201ENST00000582827 78 ntBASIC20.41■□□□□ 0.86
NPHS1O60500 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NPHS1O60500 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPHS1O60500 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPHS1O60500 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.41■□□□□ 0.86
NPHS1O60500 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPHS1O60500 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPHS1O60500 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPHS1O60500 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPHS1O60500 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPHS1O60500 IGHV3-19-201ENST00000521488 291 ntBASIC20.4■□□□□ 0.86
NPHS1O60500 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.4■□□□□ 0.86
NPHS1O60500 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPHS1O60500 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NPHS1O60500 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.4■□□□□ 0.86
NPHS1O60500 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPHS1O60500 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPHS1O60500 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NPHS1O60500 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.39■□□□□ 0.86
NPHS1O60500 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPHS1O60500 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.39■□□□□ 0.86
NPHS1O60500 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NPHS1O60500 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPHS1O60500 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPHS1O60500 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
NPHS1O60500 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPHS1O60500 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
NPHS1O60500 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPHS1O60500 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPHS1O60500 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPHS1O60500 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPHS1O60500 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.39■□□□□ 0.85
NPHS1O60500 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.39■□□□□ 0.85
NPHS1O60500 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPHS1O60500 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms