Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 AP004607.4-201ENST00000530158 1459 ntBASIC18.7■□□□□ 0.58
TRAF3IP2O43734 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP2O43734 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 AC061975.6-201ENST00000579045 1553 ntBASIC18.69■□□□□ 0.58
TRAF3IP2O43734 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP2O43734 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 AC026271.2-201ENST00000428091 497 ntBASIC18.68■□□□□ 0.58
TRAF3IP2O43734 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAF3IP2O43734 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 AC034268.1-201ENST00000441047 882 ntBASIC18.67■□□□□ 0.58
TRAF3IP2O43734 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 RARRES2P6-201ENST00000567333 442 ntBASIC18.67■□□□□ 0.58
TRAF3IP2O43734 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP2O43734 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 POU5F1P4-201ENST00000413175 1085 ntBASIC18.66■□□□□ 0.58
TRAF3IP2O43734 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 AC008175.2-201ENST00000612840 297 ntBASIC18.66■□□□□ 0.58
TRAF3IP2O43734 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.66■□□□□ 0.58
TRAF3IP2O43734 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 AL049796.1-201ENST00000565336 1766 ntBASIC18.65■□□□□ 0.58
TRAF3IP2O43734 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 AP001160.3-201ENST00000601484 763 ntBASIC18.65■□□□□ 0.58
TRAF3IP2O43734 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF3IP2O43734 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAF3IP2O43734 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms