Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PER1O15534 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
PER1O15534 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PER1O15534 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PER1O15534 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
PER1O15534 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PER1O15534 PALM-207ENST00000590161 2137 ntTSL 4 BASIC28.67■■■□□ 2.18
PER1O15534 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PER1O15534 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PER1O15534 AC004911.1-201ENST00000416316 871 ntBASIC28.67■■■□□ 2.18
PER1O15534 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
PER1O15534 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.67■■■□□ 2.18
PER1O15534 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.67■■■□□ 2.18
PER1O15534 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PER1O15534 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PER1O15534 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.67■■■□□ 2.18
PER1O15534 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PER1O15534 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.66■■■□□ 2.18
PER1O15534 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.66■■■□□ 2.18
PER1O15534 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PER1O15534 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC28.65■■■□□ 2.18
PER1O15534 GAS2L1P2-201ENST00000436355 1356 ntBASIC28.65■■■□□ 2.18
PER1O15534 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PER1O15534 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.65■■■□□ 2.18
PER1O15534 RBM17P2-201ENST00000616397 1405 ntBASIC28.65■■■□□ 2.18
PER1O15534 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.64■■■□□ 2.18
PER1O15534 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PER1O15534 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PER1O15534 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.64■■■□□ 2.18
PER1O15534 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PER1O15534 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
PER1O15534 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.64■■■□□ 2.18
PER1O15534 AC016769.1-201ENST00000409132 1010 ntBASIC28.64■■■□□ 2.18
PER1O15534 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.64■■■□□ 2.18
PER1O15534 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC28.64■■■□□ 2.18
PER1O15534 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.64■■■□□ 2.18
PER1O15534 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.64■■■□□ 2.18
PER1O15534 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.64■■■□□ 2.18
PER1O15534 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
PER1O15534 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC28.63■■■□□ 2.17
PER1O15534 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
PER1O15534 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC28.63■■■□□ 2.17
PER1O15534 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
PER1O15534 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
PER1O15534 CNN2P6-201ENST00000439038 900 ntBASIC28.63■■■□□ 2.17
PER1O15534 FGF8-207ENST00000618991 856 ntTSL 3 BASIC28.63■■■□□ 2.17
PER1O15534 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PER1O15534 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PER1O15534 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PER1O15534 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC28.62■■■□□ 2.17
PER1O15534 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.62■■■□□ 2.17
PER1O15534 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
PER1O15534 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
PER1O15534 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.62■■■□□ 2.17
PER1O15534 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.62■■■□□ 2.17
PER1O15534 CDCA4P2-201ENST00000441182 718 ntBASIC28.62■■■□□ 2.17
PER1O15534 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PER1O15534 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PER1O15534 AC243732.1-201ENST00000612648 864 ntBASIC28.62■■■□□ 2.17
PER1O15534 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC28.62■■■□□ 2.17
PER1O15534 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PER1O15534 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC28.62■■■□□ 2.17
PER1O15534 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PER1O15534 PARN-205ENST00000539279 1557 ntTSL 2 BASIC28.62■■■□□ 2.17
PER1O15534 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PER1O15534 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PER1O15534 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
PER1O15534 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.61■■■□□ 2.17
PER1O15534 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.61■■■□□ 2.17
PER1O15534 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
PER1O15534 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PER1O15534 AC010536.3-201ENST00000620306 533 ntBASIC28.61■■■□□ 2.17
PER1O15534 AF106564.1-201ENST00000607058 2553 ntBASIC28.61■■■□□ 2.17
PER1O15534 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
PER1O15534 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PER1O15534 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
PER1O15534 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PER1O15534 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
PER1O15534 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PER1O15534 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PER1O15534 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PER1O15534 BID-214ENST00000617586 542 ntTSL 5 BASIC28.6■■■□□ 2.17
PER1O15534 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PER1O15534 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PER1O15534 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC28.59■■■□□ 2.17
PER1O15534 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PER1O15534 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
PER1O15534 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PER1O15534 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PER1O15534 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PER1O15534 AC080038.1-201ENST00000611274 1154 ntBASIC28.59■■■□□ 2.17
PER1O15534 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PER1O15534 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PER1O15534 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms