Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD9O15198 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SMAD9O15198 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD9O15198 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD9O15198 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD9O15198 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD9O15198 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SMAD9O15198 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SMAD9O15198 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.97■□□□□ 0.63
SMAD9O15198 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.97■□□□□ 0.63
SMAD9O15198 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMAD9O15198 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD9O15198 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD9O15198 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.96■□□□□ 0.63
SMAD9O15198 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.96■□□□□ 0.63
SMAD9O15198 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SMAD9O15198 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.96■□□□□ 0.63
SMAD9O15198 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.96■□□□□ 0.63
SMAD9O15198 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.96■□□□□ 0.63
SMAD9O15198 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD9O15198 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SMAD9O15198 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD9O15198 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD9O15198 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
SMAD9O15198 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SMAD9O15198 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD9O15198 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD9O15198 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMAD9O15198 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
SMAD9O15198 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.95■□□□□ 0.62
SMAD9O15198 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.95■□□□□ 0.62
SMAD9O15198 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.95■□□□□ 0.62
SMAD9O15198 EEF1DP3-203ENST00000566025 782 ntBASIC18.95■□□□□ 0.62
SMAD9O15198 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.95■□□□□ 0.62
SMAD9O15198 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMAD9O15198 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMAD9O15198 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.94■□□□□ 0.62
SMAD9O15198 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SMAD9O15198 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.94■□□□□ 0.62
SMAD9O15198 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 AC104187.1-201ENST00000607510 612 ntBASIC18.94■□□□□ 0.62
SMAD9O15198 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.94■□□□□ 0.62
SMAD9O15198 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMAD9O15198 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SMAD9O15198 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMAD9O15198 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMAD9O15198 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD9O15198 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD9O15198 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.93■□□□□ 0.62
SMAD9O15198 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.93■□□□□ 0.62
SMAD9O15198 AC053503.5-201ENST00000601508 636 ntBASIC18.93■□□□□ 0.62
SMAD9O15198 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.93■□□□□ 0.62
SMAD9O15198 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMAD9O15198 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms