Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SIRPB1O00241 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SIRPB1O00241 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.7■□□□□ 0.42
SIRPB1O00241 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.7■□□□□ 0.42
SIRPB1O00241 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.7■□□□□ 0.42
SIRPB1O00241 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.7■□□□□ 0.42
SIRPB1O00241 AL354811.1-201ENST00000610286 706 ntBASIC17.7■□□□□ 0.42
SIRPB1O00241 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.7■□□□□ 0.42
SIRPB1O00241 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.7■□□□□ 0.42
SIRPB1O00241 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.7■□□□□ 0.42
SIRPB1O00241 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.69■□□□□ 0.42
SIRPB1O00241 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIRPB1O00241 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.69■□□□□ 0.42
SIRPB1O00241 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.69■□□□□ 0.42
SIRPB1O00241 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIRPB1O00241 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIRPB1O00241 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
SIRPB1O00241 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.68■□□□□ 0.42
SIRPB1O00241 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.68■□□□□ 0.42
SIRPB1O00241 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.68■□□□□ 0.42
SIRPB1O00241 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.68■□□□□ 0.42
SIRPB1O00241 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.68■□□□□ 0.42
SIRPB1O00241 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.68■□□□□ 0.42
SIRPB1O00241 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIRPB1O00241 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.67■□□□□ 0.42
SIRPB1O00241 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.67■□□□□ 0.42
SIRPB1O00241 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SIRPB1O00241 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 IRS3P-201ENST00000223076 1006 ntBASIC17.67■□□□□ 0.42
SIRPB1O00241 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.67■□□□□ 0.42
SIRPB1O00241 MIR638-201ENST00000385237 100 ntBASIC17.67■□□□□ 0.42
SIRPB1O00241 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.67■□□□□ 0.42
SIRPB1O00241 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.67■□□□□ 0.42
SIRPB1O00241 AL358852.1-201ENST00000623174 1268 ntBASIC17.67■□□□□ 0.42
SIRPB1O00241 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.67■□□□□ 0.42
SIRPB1O00241 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.67■□□□□ 0.42
SIRPB1O00241 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIRPB1O00241 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.66■□□□□ 0.42
SIRPB1O00241 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.66■□□□□ 0.42
SIRPB1O00241 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SIRPB1O00241 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.66■□□□□ 0.42
SIRPB1O00241 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.66■□□□□ 0.42
SIRPB1O00241 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.66■□□□□ 0.42
SIRPB1O00241 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.66■□□□□ 0.42
SIRPB1O00241 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.66■□□□□ 0.42
SIRPB1O00241 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.66■□□□□ 0.42
SIRPB1O00241 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIRPB1O00241 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.65■□□□□ 0.42
SIRPB1O00241 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.65■□□□□ 0.42
SIRPB1O00241 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.65■□□□□ 0.42
SIRPB1O00241 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.65■□□□□ 0.42
SIRPB1O00241 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.65■□□□□ 0.42
SIRPB1O00241 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 AL049796.1-201ENST00000565336 1766 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms