Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.28■□□□□ 0.84
CNOT1A5YKK6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT1A5YKK6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.27■□□□□ 0.83
CNOT1A5YKK6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 AC239809.2-201ENST00000415381 517 ntBASIC20.26■□□□□ 0.83
CNOT1A5YKK6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.26■□□□□ 0.83
CNOT1A5YKK6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 AC092368.3-202ENST00000574180 1591 ntBASIC20.25■□□□□ 0.83
CNOT1A5YKK6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT1A5YKK6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT1A5YKK6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 RARRES2P10-201ENST00000564312 460 ntBASIC20.23■□□□□ 0.83
CNOT1A5YKK6 AC124016.1-201ENST00000609552 612 ntBASIC20.23■□□□□ 0.83
CNOT1A5YKK6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT1A5YKK6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms