Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV6-4A0A1B0GX49 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-4A0A1B0GX49 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRBV6-4A0A1B0GX49 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-4A0A1B0GX49 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 MIR638-201ENST00000385237 100 ntBASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC027612.3-201ENST00000413684 1047 ntBASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC079140.4-201ENST00000507448 529 ntBASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRBV6-4A0A1B0GX49 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 KRT87P-202ENST00000534226 1464 ntBASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-4A0A1B0GX49 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC008175.2-201ENST00000612840 297 ntBASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 MIR6084-201ENST00000622012 110 ntBASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 AP004607.4-201ENST00000530158 1459 ntBASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-4A0A1B0GX49 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 LINC02228-203ENST00000641970 1355 ntBASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms