Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 AC010525.1-201ENST00000585559 441 ntBASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 AC092171.4-201ENST00000609130 632 ntBASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TSPY9P-201ENST00000440215 945 ntBASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 TSPY11P-201ENST00000442607 1045 ntBASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRBV6-1A0A0K0K1D8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms