Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV34A0A0B4J273 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.14■□□□□ 0.18
TRAV34A0A0B4J273 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV34A0A0B4J273 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 AL499627.2-201ENST00000606283 725 ntBASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 AC021242.3-201ENST00000607598 1377 ntBASIC16.13■□□□□ 0.17
TRAV34A0A0B4J273 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV34A0A0B4J273 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms