Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 AL162377.1-201ENST00000618844 1793 ntBASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
TRAV1-2A0A0B4J238 AP006587.3-201ENST00000525742 1516 ntBASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV1-2A0A0B4J238 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 MIR3181-201ENST00000578512 73 ntBASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV1-2A0A0B4J238 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV1-2A0A0B4J238 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV1-2A0A0B4J238 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV1-2A0A0B4J238 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 AC099791.2-201ENST00000605725 427 ntBASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 MIR6724-1-201ENST00000616420 92 ntBASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 MIR6724-2-201ENST00000616483 92 ntBASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 MIR6724-4-201ENST00000617390 92 ntBASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 MIR6724-3-201ENST00000622482 92 ntBASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV1-2A0A0B4J238 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms