Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV6A0A075B6T7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 AL592293.1-201ENST00000502889 1188 ntBASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV6A0A075B6T7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 AC027702.1-201ENST00000563810 1770 ntBASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 DUX4L4-201ENST00000566884 1269 ntBASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV6A0A075B6T7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV6A0A075B6T7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV6A0A075B6T7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms