Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DRB4X5D2U9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DRB4X5D2U9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRB4X5D2U9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DRB4X5D2U9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB4X5D2U9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB4X5D2U9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DRB4X5D2U9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB4X5D2U9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.84■□□□□ 0.77
HLA-DRB4X5D2U9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB4X5D2U9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HLA-DRB4X5D2U9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DRB4X5D2U9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HLA-DRB4X5D2U9 CAHM-201ENST00000604200 896 ntBASIC19.83■□□□□ 0.77
HLA-DRB4X5D2U9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DRB4X5D2U9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB4X5D2U9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB4X5D2U9 AC139426.1-201ENST00000568218 2529 ntBASIC19.81■□□□□ 0.76
HLA-DRB4X5D2U9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB4X5D2U9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB4X5D2U9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB4X5D2U9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB4X5D2U9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB4X5D2U9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB4X5D2U9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DRB4X5D2U9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRB4X5D2U9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRB4X5D2U9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DRB4X5D2U9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRB4X5D2U9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.77■□□□□ 0.76
HLA-DRB4X5D2U9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HLA-DRB4X5D2U9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRB4X5D2U9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HLA-DRB4X5D2U9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRB4X5D2U9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRB4X5D2U9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRB4X5D2U9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRB4X5D2U9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRB4X5D2U9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DRB4X5D2U9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DRB4X5D2U9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRB4X5D2U9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DRB4X5D2U9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DRB4X5D2U9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRB4X5D2U9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DRB4X5D2U9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DRB4X5D2U9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DRB4X5D2U9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRB4X5D2U9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRB4X5D2U9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DRB4X5D2U9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DRB4X5D2U9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DRB4X5D2U9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HLA-DRB4X5D2U9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DRB4X5D2U9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DRB4X5D2U9 ABCB10P3-201ENST00000561950 2166 ntBASIC19.71■□□□□ 0.75
HLA-DRB4X5D2U9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DRB4X5D2U9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DRB4X5D2U9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRB4X5D2U9 SUZ12P1-203ENST00000578195 985 ntBASIC19.69■□□□□ 0.74
HLA-DRB4X5D2U9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRB4X5D2U9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRB4X5D2U9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRB4X5D2U9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRB4X5D2U9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRB4X5D2U9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRB4X5D2U9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DRB4X5D2U9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DRB4X5D2U9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRB4X5D2U9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DRB4X5D2U9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DRB4X5D2U9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRB4X5D2U9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HLA-DRB4X5D2U9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRB4X5D2U9 AL135925.1-201ENST00000605920 1701 ntBASIC19.65■□□□□ 0.74
HLA-DRB4X5D2U9 ABCB10P1-201ENST00000614297 2181 ntBASIC19.65■□□□□ 0.74
HLA-DRB4X5D2U9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DRB4X5D2U9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.64■□□□□ 0.74
HLA-DRB4X5D2U9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DRB4X5D2U9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRB4X5D2U9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRB4X5D2U9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DRB4X5D2U9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRB4X5D2U9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DRB4X5D2U9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRB4X5D2U9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRB4X5D2U9 ST7-AS1-201ENST00000456775 1889 ntBASIC19.62■□□□□ 0.73
HLA-DRB4X5D2U9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRB4X5D2U9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DRB4X5D2U9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DRB4X5D2U9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DRB4X5D2U9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms